Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015842648.1_cds_XP_016508438.1_21457
CDS Infomation

[gene=LOC107826018] [db_xref=GeneID:107826018] [protein=LOW QUALITY PROTEIN: UPF0603 protein At1g54780, chloroplastic] [transl_except=(pos:490..492,aa:Other),(pos:496..498,aa:Other)] [protein_id=XP_016508438.1] [location=join(14964..15416,15537..15735,17420..17667)] [gbkey=CDS]
Sequence

ATGGAAACCATTCTCTCCCCTCCTTCTCTTTGTCCTCTCTTCAACCCCAAAACAGCTTCC
CTTTCAAAGCCTTTTCTTCCCCTCTCTCACTTACCTAGATCAAGTTCAATAAGTTCAGCT
AAGCCAATTTGCTGCAGCCTCAAGAAACAAGCTTCCAAGATTGACAAAGACTCATCTTTT
TCAATACCCAAAAGTTGGTTTTCCAGTGTTCAGCAAGGATTAGCTGCTGTAGCTATTTCT
TTAGCCCTCAATTTTTGTCCAGTTGTGTTATCTGGTTCTGCATTGGCTTCTGAATTTGAT
GTGCTAAATGAAGGTCCTCCAAAGGACTCCTATGTGGTCGATGATGCTGGTGTACTTAGT
AGGGTGACAAAGTCTGATTTGAAGGCATTGTTGTCTGATGTGGAGAAGAGAAAAGGCTTC
CACATTAATTTCATCACTGTCCGCAAACTCACTTTTTCTCATAAATCCTTTGTGAAACTT
AAGTGCTGGTAGGCCTAAACCTGTAAATTANCGAGTGTTGAGCAAGGAAATGACAAGGGT
ATAGTTGTGCTCATTACAAGTCAAAAGGAAGGCGCGATAACTGGTGGTCCTGAATTTGTA
AAGGCTGTTGGAGACACTGTTCTTGATGCTACTGTCTCAGAGAACCTTCCAGTCTTGGCT
ACTGAAGAGAAGTACAATGAAGCAATTTACAGCACTGCCAAACGTCTTGTTGCTGCCATT
GATGGCCTTCCTGATCCTGGGGGTCCCCAGCTCAAGGATAATAAAAGAGAATCCAATTTC
AAATCCAGAGAGGAAACAGATGAGAAAAGAGGACAATTCACACTTGTCGTTGGTGGCTTG
TTAGTGATTGCTTTCGTTGTTCCCATGGCTCAATACTATGCATATGTTTCAAAGAAGTGA

Peptide Sequence

PEP ID

XP_016508438.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: UPF0603 protein At1g54780, chloroplastic [Nicotiana tabacum]
Sequence

METILSPPSLCPLFNPKTASLSKPFLPLSHLPRSSSISSAKPICCSLKKQASKIDKDSSF
SIPKSWFSSVQQGLAAVAISLALNFCPVVLSGSALASEFDVLNEGPPKDSYVVDDAGVLS
RVTKSDLKALLSDVEKRKGFHINFITVRKLTFSHKSFVKLKCWXAXTCKLXSVEQGNDKG
IVVLITSQKEGAITGGPEFVKAVGDTVLDATVSENLPVLATEEKYNEAIYSTAKRLVAAI
DGLPDPGGPQLKDNKRESNFKSREETDEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSKK

Transcript Sequence

Gene sequence data has not been registered.